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Cofit
Protein
Homologs
Top cofit genes for Psest_0507 from
Pseudomonas stutzeri RCH2
Uncharacterized membrane-associated protein
SEED: DedA protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_1804
Superfamily II DNA and RNA helicases
0.40
0.39
2
Psest
_4092
Ectoine synthase.
no
0.36
3
Psest
_3235
Protein of unknown function (DUF1329).
no
0.35
4
Psest
_1122
putative adhesin (DUF1302)
(from data)
no
0.33
5
Psest
_3444
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
no
0.33
6
Psest
_1924
adhesin-associated MmpL efflux pump
(from data)
no
0.33
7
Psest
_0264
monofunctional biosynthetic peptidoglycan transglycosylase
0.29
0.33
8
Psest
_0487
Uncharacterized protein conserved in bacteria
0.33
0.32
9
Psest
_3472
Long-chain acyl-CoA synthetases (AMP-forming)
0.43
0.31
10
Psest
_1725
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
0.20
0.31
11
Psest
_4169
ATPase FliI/YscN family
no
0.30
12
Psest
_3886
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
no
0.30
13
Psest
_3296
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
0.40
0.30
14
Psest
_1923
adhesin-associated BNR repeat protein
(from data)
no
0.29
15
Psest
_3901
diguanylate cyclase (GGDEF) domain
no
0.29
16
Psest
_0056
Glutathione S-transferase
no
0.29
17
Psest
_0358
Neutral trehalase
no
0.29
18
Psest
_3900
Spermidine/putrescine-binding periplasmic protein
no
0.29
19
Psest
_1086
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
no
0.28
20
Psest
_3157
hypothetical protein
no
0.28
Or look for
negative cofitness