Top cofit genes for Psest_0445 from Pseudomonas stutzeri RCH2

PAS domain S-box/diguanylate cyclase (GGDEF) domain
SEED: Sensory box/GGDEF family protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Psest_4097		PAS domain S-box/diguanylate cyclase (GGDEF) domain	0.22	0.72
2	Psest_0285		pilus retraction protein PilT	0.74	0.66
3	Psest_1765		Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	0.75	0.64
4	Psest_1163		diguanylate cyclase (GGDEF) domain	0.91	0.64
5	Psest_0136		amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family	no	0.56
6	Psest_0297		Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	0.31	0.56
7	Psest_0248		Transcriptional regulator	0.31	0.56
8	Psest_3288		type IV-A pilus assembly ATPase PilB	0.64	0.55
9	Psest_1724		Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)	0.90	0.55
10	Psest_4297		PAS domain S-box	no	0.55
11	Psest_4017		hypothetical protein	no	0.54
12	Psest_0491		PAS domain S-box/diguanylate cyclase (GGDEF) domain	no	0.54
13	Psest_3916		hypothetical protein	no	0.53
14	Psest_4251		hypothetical protein	no	0.53
15	Psest_2323		Uncharacterized protein conserved in archaea	no	0.52
16	Psest_0138		ABC-type amino acid transport/signal transduction systems, periplasmic component/domain	no	0.51
17	Psest_0262		PAS domain S-box	no	0.51
18	Psest_3645		Predicted redox protein, regulator of disulfide bond formation	no	0.51
19	Psest_4175		Flagellar motor switch/type III secretory pathway protein	no	0.51
20	Psest_3717		Tfp pilus assembly protein PilO	0.65	0.50

Or look for negative cofitness