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Cofit
Protein
Homologs
Top cofit genes for Psest_4409 from
Pseudomonas stutzeri RCH2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_0192
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
no
0.28
2
Psest
_4382
hypothetical protein
no
0.28
3
Psest
_3963
PAS domain S-box
no
0.28
4
Psest
_4379
hypothetical protein
no
0.25
5
Psest
_4403
hypothetical protein
no
0.23
6
Psest
_3442
Beta-lactamase class A
no
0.22
7
Psest
_1725
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
no
0.22
8
Psest
_3100
RNA polymerase sigma factor RpoE
no
0.21
9
Psest
_4397
hypothetical protein
no
0.21
10
Psest
_4008
PAS domain S-box
no
0.21
11
Psest
_0538
Signal transduction histidine kinase
no
0.20
12
Psest
_0717
Protein of unknown function (DUF1631).
no
0.20
13
Psest
_3974
Anti-sigma regulatory factor (Ser/Thr protein kinase)
no
0.20
14
Psest
_2143
efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
no
0.20
15
Psest
_0360
Predicted permease, DMT superfamily
no
0.19
16
Psest
_3296
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
no
0.19
17
Psest
_2998
Glutathione peroxidase
no
0.18
18
Psest
_0993
Glucose-6-phosphate isomerase
no
0.18
19
Psest
_4273
Lysophospholipase
no
0.18
20
Psest
_3241
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.18
Or look for
negative cofitness