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  • Top cofit genes for Psest_4338 from Pseudomonas stutzeri RCH2

    Fe2+-dicitrate sensor, membrane component
    SEED: putative FecR protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0487 Uncharacterized protein conserved in bacteria 0.49 0.41
    2 Psest_1471 Predicted membrane protein no 0.40
    3 Psest_3465 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain no 0.37
    4 Psest_3100 RNA polymerase sigma factor RpoE 0.17 0.36
    5 Psest_3128 Protein-disulfide isomerase no 0.35
    6 Psest_0514 lytic murein transglycosylase B 0.57 0.34
    7 Psest_1510 Putative Zn-dependent protease, contains TPR repeats 0.48 0.32
    8 Psest_0725 Negative regulator of beta-lactamase expression no 0.32
    9 Psest_0032 D-alanyl-D-alanine carboxypeptidase 0.43 0.32
    10 Psest_4169 ATPase FliI/YscN family no 0.31
    11 Psest_3463 Methylase involved in ubiquinone/menaquinone biosynthesis no 0.31
    12 Psest_1002 glutamyl-queuosine tRNA(Asp) synthetase 0.37 0.31
    13 Psest_1804 Superfamily II DNA and RNA helicases no 0.31
    14 Psest_2427 SH3 domain protein no 0.31
    15 Psest_3462 Lipopolysaccharide kinase (Kdo/WaaP) family. no 0.31
    16 Psest_0028 Coproporphyrinogen III oxidase 0.56 0.30
    17 Psest_3974 Anti-sigma regulatory factor (Ser/Thr protein kinase) no 0.29
    18 Psest_0056 Glutathione S-transferase no 0.29
    19 Psest_0521 lytic murein transglycosylase no 0.29
    20 Psest_2555 hypothetical protein no 0.29

    Or look for negative cofitness