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Cofit
Protein
Homologs
Top cofit genes for Psest_4324 from
Pseudomonas stutzeri RCH2
DNA repair photolyase
SEED: Radical SAM domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2906
tRNA_Thr_CGT
no
0.22
2
Psest
_4128
Universal stress protein UspA and related nucleotide-binding proteins
no
0.21
3
Psest
_1166
transcriptional regulator, ArgP family
no
0.21
4
Psest
_0190
Uncharacterized conserved protein
no
0.20
5
Psest
_4283
Spermidine/putrescine-binding periplasmic protein
0.61
0.20
6
Psest
_1512
Predicted permease
no
0.19
7
Psest
_3822
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
no
0.19
8
Psest
_3514
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
(from data)
0.61
0.19
9
Psest
_1852
Uncharacterized conserved protein
0.36
0.18
10
Psest
_0267
Uncharacterized enzyme of thiazole biosynthesis
no
0.18
11
Psest
_0127
type VI secretion protein, VC_A0110 family
no
0.18
12
Psest
_1376
hypothetical protein
no
0.18
13
Psest
_3761
Transcription elongation factor
no
0.17
14
Psest
_3513
Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
(from data)
no
0.17
15
Psest
_1272
Protein of Unknown function (DUF2784).
no
0.17
16
Psest
_2858
Predicted integral membrane protein
no
0.17
17
Psest
_2349
urea carboxylase-associated protein 1
0.40
0.17
18
Psest
_0718
nicotinate-nucleotide pyrophosphorylase
no
0.17
19
Psest
_0123
Rhs element Vgr protein
no
0.17
20
Psest
_0586
hypothetical protein
no
0.17
Or look for
negative cofitness