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  • Top cofit genes for Psest_4320 from Pseudomonas stutzeri RCH2

    Zn-dependent oligopeptidases
    SEED: Oligopeptidase A (EC 3.4.24.70)
    KEGG: oligopeptidase A

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3216 diguanylate cyclase (GGDEF) domain no 0.32
    2 Psest_3217 PAS domain S-box no 0.31
    3 Psest_2634 glycine betaine aldehyde dehydrogenase 0.78 0.28
    4 Psest_2095 Arabinose efflux permease no 0.28
    5 Psest_0028 Coproporphyrinogen III oxidase 0.89 0.27
    6 Psest_3900 Spermidine/putrescine-binding periplasmic protein no 0.27
    7 Psest_2462 selenium donor protein 0.24 0.27
    8 Psest_1953 deoxyguanosinetriphosphate triphosphohydrolase, putative 0.37 0.26
    9 Psest_1455 diguanylate cyclase (GGDEF) domain 0.34 0.26
    10 Psest_4293 PAS domain S-box/diguanylate cyclase (GGDEF) domain no 0.26
    11 Psest_0446 hypothetical protein no 0.25
    12 Psest_2072 Methyltransferase domain. 0.58 0.25
    13 Psest_0276 putative oxygen-independent coproporphyrinogen III oxidase 0.62 0.25
    14 Psest_2551 1-aminocyclopropane-1-carboxylate deaminase no 0.24
    15 Psest_3043 periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family no 0.24
    16 Psest_1924 adhesin-associated MmpL efflux pump (from data) 0.33 0.24
    17 Psest_4163 hypothetical protein no 0.24
    18 Psest_1840 Undecaprenyl-phosphate glucose phosphotransferase 0.55 0.24
    19 Psest_1491 Cold shock proteins 0.54 0.24
    20 Psest_0696 hypothetical protein 0.33 0.23

    Or look for negative cofitness