Top cofit genes for Psest_4297 from Pseudomonas stutzeri RCH2

PAS domain S-box
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Psest_0445		PAS domain S-box/diguanylate cyclase (GGDEF) domain	no	0.55
2	Psest_0491		PAS domain S-box/diguanylate cyclase (GGDEF) domain	no	0.48
3	Psest_3716		Tfp pilus assembly protein PilP	no	0.46
4	Psest_4381		Protein of unknown function (DUF1652).	no	0.45
5	Psest_1163		diguanylate cyclase (GGDEF) domain	no	0.44
6	Psest_3717		Tfp pilus assembly protein PilO	no	0.44
7	Psest_3715		type IV pilus secretin (or competence protein) PilQ	no	0.44
8	Psest_1260		type IV pilus biogenesis/stability protein PilW	no	0.44
9	Psest_3288		type IV-A pilus assembly ATPase PilB	no	0.43
10	Psest_4005		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	no	0.43
11	Psest_4097		PAS domain S-box/diguanylate cyclase (GGDEF) domain	no	0.43
12	Psest_0285		pilus retraction protein PilT	no	0.42
13	Psest_1772		Aspartate/tyrosine/aromatic aminotransferase	no	0.42
14	Psest_0262		PAS domain S-box	no	0.41
15	Psest_3375		prepilin-type N-terminal cleavage/methylation domain	no	0.41
16	Psest_0170		5,10-methenyltetrahydrofolate synthetase	no	0.40
17	Psest_3719		type IV pilus assembly protein PilM	no	0.40
18	Psest_3866		threonine ammonia-lyase, biosynthetic, long form	no	0.40
19	Psest_4298		Response regulator containing a CheY-like receiver domain and a GGDEF domain	no	0.39
20	Psest_3809		hypothetical protein	no	0.39

Or look for negative cofitness