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  • Top cofit genes for Psest_0418 from Pseudomonas stutzeri RCH2

    diguanylate cyclase (GGDEF) domain
    SEED: GGDEF domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1700 Transcriptional regulator 0.34 0.78
    2 Psest_2645 Transcriptional regulator 0.30 0.67
    3 Psest_0636 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein no 0.37
    4 Psest_1569 PAS domain S-box/diguanylate cyclase (GGDEF) domain no 0.37
    5 Psest_2029 Putative arginyl-tRNA:protein arginylyltransferase no 0.36
    6 Psest_0350 Predicted signal-transduction protein containing cAMP-binding and CBS domains 0.63 0.35
    7 Psest_3970 Transcriptional regulator no 0.35
    8 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type no 0.33
    9 Psest_4140 Acyl-CoA dehydrogenases no 0.32
    10 Psest_2026 Uncharacterized conserved protein no 0.32
    11 Psest_2461 tRNA 2-selenouridine synthase 0.47 0.30
    12 Psest_0541 succinate CoA transferases no 0.29
    13 Psest_2651 DNA topoisomerase I, bacterial no 0.27
    14 Psest_1187 exodeoxyribonuclease III no 0.26
    15 Psest_2720 Enoyl-CoA hydratase/carnithine racemase 0.26 0.26
    16 Psest_4229 Transcriptional regulator no 0.26
    17 Psest_4139 PAS domain S-box no 0.26
    18 Psest_2806 RNA polymerase sigma factor RpoS 0.30 0.26
    19 Psest_0142 Micrococcal nuclease (thermonuclease) homologs no 0.26
    20 Psest_0912 Tellurite resistance protein TerB. no 0.25

    Or look for negative cofitness