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Cofit
Protein
Homologs
Top cofit genes for Psest_4228 from
Pseudomonas stutzeri RCH2
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3856
ABC-type branched-chain amino acid transport system, permease component
no
0.28
2
Psest
_3845
phosphate regulon transcriptional regulatory protein PhoB
no
0.25
3
Psest
_0345
Uncharacterized protein conserved in archaea
no
0.24
4
Psest
_1334
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
no
0.24
5
Psest
_0471
hypothetical protein
no
0.24
6
Psest
_3422
hypothetical protein
no
0.24
7
Psest
_0150
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
no
0.24
8
Psest
_4343
Protein of unknown function (DUF3301).
no
0.23
9
Psest
_1546
NADH:flavin oxidoreductases, Old Yellow Enzyme family
no
0.23
10
Psest
_1875
Adenylate cyclase, family 3 (some proteins contain HAMP domain)
no
0.23
11
Psest
_0893
Transcriptional regulator
no
0.23
12
Psest
_0463
hypothetical protein
no
0.23
13
Psest
_3981
hypothetical protein
no
0.22
14
Psest
_3849
Membrane proteins related to metalloendopeptidases
no
0.22
15
Psest
_0278
hypothetical protein
no
0.22
16
Psest
_3229
Methyl-accepting chemotaxis protein
no
0.22
17
Psest
_3019
Cell wall-associated hydrolases (invasion-associated proteins)
no
0.22
18
Psest
_3860
Predicted permeases
no
0.21
19
Psest
_3848
hypothetical protein
no
0.21
20
Psest
_0449
Glutamine synthetase adenylyltransferase
no
0.20
Or look for
negative cofitness