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  • Top cofit genes for Psest_4223 from Pseudomonas stutzeri RCH2

    Predicted membrane-associated, metal-dependent hydrolase
    SEED: Permease of the drug/metabolite transporter (DMT) superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1725 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain no 0.35
    2 Psest_3235 Protein of unknown function (DUF1329). 0.27 0.35
    3 Psest_2441 hypothetical protein no 0.35
    4 Psest_0247 NAD-dependent aldehyde dehydrogenases no 0.34
    5 Psest_0132 type VI secretion protein, EvpB/VC_A0108 family 0.33 0.34
    6 Psest_3974 Anti-sigma regulatory factor (Ser/Thr protein kinase) no 0.33
    7 Psest_1324 Arabinose efflux permease no 0.32
    8 Psest_4335 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems no 0.31
    9 Psest_0538 Signal transduction histidine kinase no 0.31
    10 Psest_1537 Bacterioferritin-associated ferredoxin no 0.31
    11 Psest_3977 Cold shock proteins no 0.31
    12 Psest_3976 PAS domain S-box no 0.30
    13 Psest_2479 Methyl-accepting chemotaxis protein no 0.30
    14 Psest_3068 hypothetical protein no 0.30
    15 Psest_3157 hypothetical protein no 0.30
    16 Psest_2383 Predicted transcriptional regulators no 0.30
    17 Psest_3035 Protein of unknown function (DUF1282). 0.39 0.30
    18 Psest_0431 Lactate dehydrogenase and related dehydrogenases no 0.30
    19 Psest_0270 carbamate kinase 0.26 0.29
    20 Psest_2083 Putative sterol carrier protein no 0.29

    Or look for negative cofitness