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  • Top cofit genes for Psest_4217 from Pseudomonas stutzeri RCH2

    Rhs element Vgr protein
    KEGG: type VI secretion system secreted protein VgrG

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1099 Type I restriction-modification system methyltransferase subunit no 0.24
    2 Psest_2953 Histone acetyltransferase 0.19 0.23
    3 Psest_1763 hypothetical protein no 0.22
    4 Psest_4214 hypothetical protein no 0.22
    5 Psest_1100 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases no 0.20
    6 Psest_2650 hypothetical protein no 0.20
    7 Psest_3437 diguanylate cyclase (GGDEF) domain no 0.20
    8 Psest_0129 Protein of unknown function (DUF2931). no 0.20
    9 Psest_2161 Metal-dependent hydrolase no 0.20
    10 Psest_0640 Uncharacterized conserved protein no 0.20
    11 Psest_2134 amino acid carrier protein no 0.19
    12 Psest_2139 Cation/multidrug efflux pump 0.34 0.19
    13 Psest_3932 nitrogen regulation protein NR(I) no 0.19
    14 Psest_0403 lycopene cyclase no 0.19
    15 Psest_3317 Phosphotransferase System HPr (HPr) Family 0.40 0.19
    16 Psest_0140 choline/carnitine/betaine transport no 0.19
    17 Psest_1535 FKBP-type peptidyl-prolyl cis-trans isomerases 1 0.50 0.18
    18 Psest_0909 hypothetical protein no 0.18
    19 Psest_1197 Ureidoglycolate hydrolase no 0.18
    20 Psest_0877 Restriction endonuclease no 0.18

    Or look for negative cofitness