Top cofit genes for Psest_4171 from Pseudomonas stutzeri RCH2

Flagellar motor switch protein
SEED: Flagellar motor switch protein FliG
KEGG: flagellar motor switch protein FliG

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Psest_4174		Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	no	0.34
2	Psest_2518		Predicted membrane protein	no	0.31
3	Psest_0049		Uncharacterized conserved protein	no	0.31
4	Psest_2387		FolB domain	no	0.31
5	Psest_2516		cytochrome c oxidase, subunit I	no	0.30
6	Psest_3981		hypothetical protein	no	0.30
7	Psest_0052		hypothetical protein	no	0.29
8	Psest_1885		hypothetical protein	no	0.28
9	Psest_0342		ABC-type amino acid transport/signal transduction systems, periplasmic component/domain	no	0.27
10	Psest_3003		Transcriptional regulator	no	0.27
11	Psest_2874		Predicted acyltransferases	no	0.26
12	Psest_4129		Sulfate permease and related transporters (MFS superfamily)	no	0.26
13	Psest_0840		anaerobic ribonucleoside-triphosphate reductase	no	0.26
14	Psest_1608		glycerol-3-phosphate O-acyltransferase	no	0.26
15	Psest_3786		Glycosidases	no	0.26
16	Psest_0808		prepilin-type N-terminal cleavage/methylation domain	no	0.25
17	Psest_4175		Flagellar motor switch/type III secretory pathway protein	no	0.25
18	Psest_0465		Acetyltransferase (isoleucine patch superfamily)	no	0.25
19	Psest_0158		ABC-type amino acid transport/signal transduction systems, periplasmic component/domain	no	0.25
20	Psest_0345		Uncharacterized protein conserved in archaea	no	0.24

Or look for negative cofitness