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  • Top cofit genes for Psest_4160 from Pseudomonas stutzeri RCH2

    RNA polymerase sigma factor, FliA/WhiG family
    SEED: RNA polymerase sigma factor for flagellar operon
    KEGG: RNA polymerase sigma factor for flagellar operon FliA

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0231 phosphoesterase, MJ0936 family no 0.26
    2 Psest_3191 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases no 0.23
    3 Psest_2559 Cytochrome bd-type quinol oxidase, subunit 1 no 0.21
    4 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis no 0.21
    5 Psest_0781 phenylalanine-4-hydroxylase, monomeric form no 0.21
    6 Psest_3993 alpha-L-glutamate ligases, RimK family no 0.20
    7 Psest_2896 hypothetical protein no 0.20
    8 Psest_3529 Uncharacterized protein conserved in bacteria no 0.20
    9 Psest_4272 hypothetical protein no 0.20
    10 Psest_1097 hypothetical protein no 0.19
    11 Psest_0536 thiamine-phosphate pyrophosphorylase no 0.19
    12 Psest_0477 thiamine biosynthesis protein ThiC no 0.19
    13 Psest_3077 Protein of unknown function (DUF3203). no 0.19
    14 Psest_1035 hypothetical protein no 0.19
    15 Psest_1980 Uncharacterized conserved protein no 0.19
    16 Psest_1892 6-phosphogluconate dehydratase no 0.19
    17 Psest_3470 Uncharacterized conserved protein no 0.18
    18 Psest_2847 Multisubunit Na+/H+ antiporter, MnhF subunit no 0.18
    19 Psest_3512 fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) (from data) no 0.18
    20 Psest_0076 NhaP-type Na+/H+ and K+/H+ antiporters no 0.18

    Or look for negative cofitness