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  • Top cofit genes for Psest_4133 from Pseudomonas stutzeri RCH2

    RNA polymerase sigma factor, sigma-70 family
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2889 Predicted flavoprotein involved in K+ transport 0.21 0.43
    2 Psest_3966 Predicted thioesterase 0.22 0.40
    3 Psest_2890 diguanylate cyclase (GGDEF) domain no 0.40
    4 Psest_0055 hypothetical protein no 0.39
    5 Psest_3660 PAS domain S-box no 0.39
    6 Psest_0899 Excinuclease ATPase subunit no 0.37
    7 Psest_0056 Glutathione S-transferase 0.22 0.37
    8 Psest_3229 Methyl-accepting chemotaxis protein no 0.35
    9 Psest_0562 magnesium-translocating P-type ATPase no 0.35
    10 Psest_2914 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family no 0.34
    11 Psest_0037 trehalose synthase, Pseudomonas stutzeri type no 0.34
    12 Psest_0036 Predicted membrane protein no 0.34
    13 Psest_2763 Cellobiose phosphorylase no 0.33
    14 Psest_1575 Beta-glucosidase-related glycosidases no 0.33
    15 Psest_1561 Uncharacterized conserved protein no 0.33
    16 Psest_1363 Predicted membrane protein no 0.32
    17 Psest_0408 Protein involved in catabolism of external DNA no 0.32
    18 Psest_2516 cytochrome c oxidase, subunit I no 0.32
    19 Psest_0318 NAD-dependent DNA ligase (contains BRCT domain type II) no 0.32
    20 Psest_3445 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs no 0.31

    Or look for negative cofitness