Top cofit genes for Psest_4132 from Pseudomonas stutzeri RCH2

alpha-ketoglutarate DNA-binding response regulator (mifR) (from data)
Original annotation: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SEED: Nitrogen regulation protein NtrX
KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

Rank Hit Name Description Conserved? Cofitness  
1 Psest_0084 alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) no 0.58
2 Psest_0085 alpha-ketoglutarate TRAP transporter, solute receptor component (from data) 0.30 0.54
3 Psest_4131 alpha-ketoglutarate sensor protein (mifS) (from data) 0.94 0.52
4 Psest_0471 hypothetical protein no 0.23
5 Psest_3969 3-hydroxyacyl-CoA dehydrogenase 0.24 0.22
6 Psest_0345 Uncharacterized protein conserved in archaea no 0.21
7 Psest_3782 Alcohol dehydrogenase, class IV no 0.21
8 Psest_1560 hypothetical protein no 0.20
9 Psest_1571 cytochrome c oxidase accessory protein FixG no 0.20
10 Psest_1545 Anaerobic dehydrogenases, typically selenocysteine-containing 0.34 0.20
11 Psest_3661 Protein of unknown function (DUF3530). 0.12 0.19
12 Psest_0556 Curlin associated repeat. no 0.19
13 Psest_1597 Protein of unknown function (DUF2933). no 0.18
14 Psest_2338 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component no 0.18
15 Psest_1340 rarD protein no 0.18
16 Psest_0899 Excinuclease ATPase subunit no 0.17
17 Psest_2164 Uncharacterized conserved protein 0.47 0.17
18 Psest_0808 prepilin-type N-terminal cleavage/methylation domain no 0.17
19 Psest_2397 Deoxyribodipyrimidine photolyase no 0.17
20 Psest_3982 hypothetical protein no 0.16

Or look for negative cofitness