Top cofit genes for Psest_4123 from Pseudomonas stutzeri RCH2

Site-specific recombinase XerD
SEED: Probable bacteriophage integrase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Psest_4175		Flagellar motor switch/type III secretory pathway protein	no	0.53
2	Psest_4250		hypothetical protein	no	0.49
3	Psest_4251		hypothetical protein	no	0.46
4	Psest_4017		hypothetical protein	no	0.45
5	Psest_0879		Transcriptional regulator	no	0.44
6	Psest_4396		Site-specific recombinases, DNA invertase Pin homologs	no	0.43
7	Psest_3916		hypothetical protein	no	0.42
8	Psest_3981		hypothetical protein	no	0.41
9	Psest_0873		HipA N-terminal domain	no	0.40
10	Psest_4215		hypothetical protein	no	0.40
11	Psest_1041		Predicted membrane protein	0.14	0.39
12	Psest_0804		hypothetical protein	no	0.39
13	Psest_0880		NADPH:quinone reductase and related Zn-dependent oxidoreductases	no	0.38
14	Psest_0589		Uncharacterized protein conserved in bacteria	no	0.38
15	Psest_0120		hypothetical protein	no	0.38
16	Psest_0626		hypothetical protein	no	0.38
17	Psest_3504		Predicted acyltransferases	no	0.37
18	Psest_3019		Cell wall-associated hydrolases (invasion-associated proteins)	no	0.37
19	Psest_3920		Polyketide cyclase / dehydrase and lipid transport.	no	0.37
20	Psest_4345		Bacteriophytochrome (light-regulated signal transduction histidine kinase)	no	0.37

Or look for negative cofitness