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  • Top cofit genes for Psest_0403 from Pseudomonas stutzeri RCH2

    lycopene cyclase
    SEED: Lycopene cyclase
    KEGG: lycopene beta cyclase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_4104 formate dehydrogenase, alpha subunit, proteobacterial-type no 0.34
    2 Psest_1072 TRAP transporter, DctM subunit no 0.34
    3 Psest_2669 Acyl-CoA dehydrogenases no 0.33
    4 Psest_3469 Uncharacterized protein conserved in bacteria no 0.32
    5 Psest_0387 Membrane-bound serine protease (ClpP class) no 0.29
    6 Psest_4187 Predicted permeases no 0.29
    7 Psest_2412 Predicted phosphatase 0.31 0.29
    8 Psest_0404 phytoene desaturase no 0.29
    9 Psest_2635 choline/carnitine/betaine transport no 0.29
    10 Psest_2121 Predicted ATPase no 0.28
    11 Psest_0649 Glutamate decarboxylase and related PLP-dependent proteins no 0.28
    12 Psest_3906 hypothetical protein no 0.28
    13 Psest_2631 AraC-type DNA-binding domain-containing proteins no 0.27
    14 Psest_4136 TonB-dependent siderophore receptor no 0.27
    15 Psest_0634 hypothetical protein no 0.27
    16 Psest_1213 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein no 0.27
    17 Psest_2627 hypothetical protein no 0.27
    18 Psest_0384 outer membrane porin, OprD family. no 0.26
    19 Psest_3887 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit no 0.26
    20 Psest_1424 Lipoate-protein ligase A no 0.26

    Or look for negative cofitness