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  • Top cofit genes for Psest_4008 from Pseudomonas stutzeri RCH2

    PAS domain S-box

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0717 Protein of unknown function (DUF1631). no 0.91
    2 Psest_2551 1-aminocyclopropane-1-carboxylate deaminase no 0.80
    3 Psest_3217 PAS domain S-box no 0.64
    4 Psest_3216 diguanylate cyclase (GGDEF) domain no 0.64
    5 Psest_3974 Anti-sigma regulatory factor (Ser/Thr protein kinase) no 0.63
    6 Psest_4382 hypothetical protein no 0.62
    7 Psest_0192 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains no 0.61
    8 Psest_0693 His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. no 0.57
    9 Psest_3975 Signal transduction histidine kinase no 0.56
    10 Psest_0446 hypothetical protein no 0.56
    11 Psest_4273 Lysophospholipase no 0.53
    12 Psest_0487 Uncharacterized protein conserved in bacteria no 0.51
    13 Psest_1725 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain no 0.51
    14 Psest_4140 Acyl-CoA dehydrogenases no 0.51
    15 Psest_0538 Signal transduction histidine kinase no 0.49
    16 Psest_4139 PAS domain S-box no 0.49
    17 Psest_3688 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.47
    18 Psest_4293 PAS domain S-box/diguanylate cyclase (GGDEF) domain no 0.47
    19 Psest_3100 RNA polymerase sigma factor RpoE no 0.46
    20 Psest_2555 hypothetical protein no 0.44

    Or look for negative cofitness