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  • Top cofit genes for Psest_3822 from Pseudomonas stutzeri RCH2

    Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
    SEED: transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0090 phosphonate metabolism protein PhnM no 0.40
    2 Psest_3903 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases no 0.39
    3 Psest_0574 hypothetical protein no 0.37
    4 Psest_0360 Predicted permease, DMT superfamily no 0.37
    5 Psest_2763 Cellobiose phosphorylase no 0.37
    6 Psest_3460 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily no 0.36
    7 Psest_4302 hypothetical protein no 0.35
    8 Psest_0102 malonate decarboxylase, alpha subunit no 0.34
    9 Psest_3448 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family no 0.34
    10 Psest_4237 succinate-semialdehyde dehydrogenase no 0.33
    11 Psest_0036 Predicted membrane protein no 0.33
    12 Psest_0779 tyrosine aminotransferase (EC 2.6.1.57) (from data) no 0.33
    13 Psest_0228 Glycerophosphoryl diester phosphodiesterase no 0.33
    14 Psest_3157 hypothetical protein no 0.32
    15 Psest_0034 Outer membrane receptor proteins, mostly Fe transport no 0.32
    16 Psest_0379 Galactose mutarotase and related enzymes no 0.32
    17 Psest_0382 Uncharacterized iron-regulated membrane protein no 0.32
    18 Psest_3397 Cytochrome c peroxidase no 0.31
    19 Psest_0358 Neutral trehalase no 0.31
    20 Psest_3695 Histidine ammonia-lyase no 0.31

    Or look for negative cofitness