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  • Top cofit genes for Psest_3821 from Pseudomonas stutzeri RCH2

    ATP-dependent Zn proteases
    SEED: Cell division protein FtsH (EC 3.4.24.-)
    KEGG: cell division protease FtsH

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3445 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs no 0.28
    2 Psest_4254 Catalase no 0.27
    3 Psest_0055 hypothetical protein no 0.26
    4 Psest_0899 Excinuclease ATPase subunit no 0.25
    5 Psest_0541 succinate CoA transferases no 0.25
    6 Psest_2516 cytochrome c oxidase, subunit I no 0.25
    7 Psest_2362 Zn-dependent hydrolases, including glyoxylases no 0.25
    8 Psest_2890 diguanylate cyclase (GGDEF) domain no 0.24
    9 Psest_1795 Flagellar motor component no 0.24
    10 Psest_1893 glucokinase, proteobacterial type no 0.24
    11 Psest_0663 PAS fold. no 0.24
    12 Psest_1545 Anaerobic dehydrogenases, typically selenocysteine-containing no 0.24
    13 Psest_1055 Saccharopine dehydrogenase and related proteins no 0.23
    14 Psest_1353 Uncharacterized protein conserved in bacteria no 0.23
    15 Psest_3822 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.23
    16 Psest_2219 pyruvate dehydrogenase E1 component, alpha subunit no 0.23
    17 Psest_4082 hypothetical protein no 0.23
    18 Psest_4141 3-carboxymuconate cyclase 0.34 0.23
    19 Psest_2666 Predicted acyl-CoA transferases/carnitine dehydratase no 0.23
    20 Psest_3321 Predicted amidohydrolase no 0.23

    Or look for negative cofitness