Top cofit genes for Psest_3791 from Pseudomonas stutzeri RCH2

Predicted transcriptional regulators
SEED: Putrescine utilization regulator

Rank Hit Name Description Conserved? Cofitness  
1 Psest_1484 Thiol-disulfide isomerase and thioredoxins 0.30 0.34
2 Psest_2229 Uncharacterized protein conserved in bacteria no 0.31
3 Psest_3350 Diaminopimelate decarboxylase 0.56 0.30
4 Psest_3355 fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components (from data) 0.51 0.27
5 Psest_4337 TonB-dependent siderophore receptor 0.58 0.27
6 Psest_2531 cytochrome c oxidase accessory protein FixG no 0.26
7 Psest_2484 Molecular chaperone, HSP90 family 0.78 0.26
8 Psest_1442 Curlin associated repeat. no 0.25
9 Psest_1958 Glutaredoxin-like domain (DUF836). no 0.25
10 Psest_3790 Cytochrome c5 no 0.25
11 Psest_3347 TonB-dependent siderophore receptor 0.64 0.25
12 Psest_0722 Predicted ATPase 0.64 0.24
13 Psest_2530 cytochrome c oxidase, cbb3-type, subunit III no 0.24
14 Psest_1478 Predicted membrane protein no 0.24
15 Psest_4335 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 0.25 0.23
16 Psest_2000 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.23
17 Psest_2950 putative NAD(P)H quinone oxidoreductase, PIG3 family no 0.23
18 Psest_2527 cytochrome c oxidase, cbb3-type, subunit I no 0.23
19 Psest_3354 1-phosphofructokinase (EC 2.7.1.56) (from data) no 0.22
20 Psest_3349 Sel1 repeat. no 0.22

Or look for negative cofitness