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  • Top cofit genes for Psest_3744 from Pseudomonas stutzeri RCH2

    Disulfide bond formation protein DsbB
    SEED: Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
    KEGG: disulfide bond formation protein DsbB

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0615 RND family efflux transporter, MFP subunit no 0.39
    2 Psest_0616 heavy metal efflux pump (cobalt-zinc-cadmium) no 0.36
    3 Psest_0186 Protein-disulfide isomerase 0.93 0.36
    4 Psest_2968 flagellar basal-body rod protein FlgB 0.57 0.35
    5 Psest_3322 TIGR02099 family protein 0.16 0.35
    6 Psest_0610 heavy metal sensor kinase no 0.34
    7 Psest_0614 Outer membrane protein no 0.33
    8 Psest_2967 flagellar basal-body rod protein FlgC 0.49 0.32
    9 Psest_0613 hypothetical protein no 0.30
    10 Psest_0533 Sel1 repeat. no 0.29
    11 Psest_4363 ATPases involved in chromosome partitioning 0.62 0.29
    12 Psest_0611 heavy metal response regulator no 0.29
    13 Psest_0257 Predicted Zn-dependent peptidases 0.55 0.29
    14 Psest_2576 hypothetical protein no 0.29
    15 Psest_3995 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.61 0.26
    16 Psest_1396 Cytosine/adenosine deaminases no 0.26
    17 Psest_3323 ribonuclease, Rne/Rng family 0.72 0.26
    18 Psest_3809 hypothetical protein no 0.26
    19 Psest_0445 PAS domain S-box/diguanylate cyclase (GGDEF) domain no 0.25
    20 Psest_0516 D-alanyl-D-alanine carboxypeptidase 0.57 0.25

    Or look for negative cofitness