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Cofit
Protein
Homologs
Top cofit genes for Psest_3700 from
Pseudomonas stutzeri RCH2
hypothetical protein
SEED: FIG085779: Lipoprotein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3886
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
no
0.31
2
Psest
_0849
6-phosphogluconate dehydratase
no
0.29
3
Psest
_0850
glucokinase, proteobacterial type
no
0.28
4
Psest
_0035
hypothetical protein
no
0.28
5
Psest
_3900
Spermidine/putrescine-binding periplasmic protein
no
0.27
6
Psest
_0853
6-phosphogluconolactonase
no
0.27
7
Psest
_0360
Predicted permease, DMT superfamily
no
0.27
8
Psest
_1895
Signal transduction histidine kinase
no
0.27
9
Psest
_0539
Acyl-CoA dehydrogenases
no
0.26
10
Psest
_1897
ABC-type sugar transport systems, permease components
no
0.26
11
Psest
_1898
ABC-type sugar transport system, permease component
no
0.26
12
Psest
_1923
adhesin-associated BNR repeat protein
(from data)
no
0.25
13
Psest
_3296
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
no
0.25
14
Psest
_0125
type VI secretion ATPase, ClpV1 family
0.29
0.25
15
Psest
_4246
type VI secretion protein IcmF
no
0.24
16
Psest
_1896
ABC-type sugar transport system, periplasmic component
no
0.24
17
Psest
_0852
glucose-6-phosphate 1-dehydrogenase
no
0.24
18
Psest
_3190
pyruvate kinase
no
0.24
19
Psest
_3100
RNA polymerase sigma factor RpoE
0.38
0.24
20
Psest
_1924
adhesin-associated MmpL efflux pump
(from data)
no
0.24
Or look for
negative cofitness