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  • Top cofit genes for Psest_0359 from Pseudomonas stutzeri RCH2

    Transcriptional regulators
    SEED: Predicted D-glucarate or D-galactorate regulator, GntR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2379 PAS domain S-box 0.62 0.40
    2 Psest_2380 Uncharacterized conserved protein 0.60 0.40
    3 Psest_0062 tryptophan synthase, alpha subunit 0.53 0.39
    4 Psest_0063 tryptophan synthase, beta subunit 0.57 0.37
    5 Psest_4086 Transcriptional regulator 0.69 0.37
    6 Psest_4085 Biotin carboxylase 0.69 0.37
    7 Psest_3872 FAD/FMN-containing dehydrogenases 0.46 0.37
    8 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase 0.70 0.36
    9 Psest_4084 oxaloacetate decarboxylase alpha subunit 0.70 0.36
    10 Psest_1075 Predicted transcriptional regulators 0.61 0.35
    11 Psest_3510 Na+-dependent transporters of the SNF family no 0.35
    12 Psest_3353 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component no 0.35
    13 Psest_2589 3-isopropylmalate dehydrogenase 0.85 0.34
    14 Psest_2578 O-succinylhomoserine sulfhydrylase 0.78 0.33
    15 Psest_0280 homoserine O-acetyltransferase 0.77 0.33
    16 Psest_2584 Phosphoribosylanthranilate isomerase 0.60 0.32
    17 Psest_3648 anthranilate phosphoribosyltransferase 0.63 0.32
    18 Psest_3647 Indole-3-glycerol phosphate synthase 0.58 0.32
    19 Psest_0508 gamma-glutamyl phosphate reductase 0.43 0.32
    20 Psest_0279 methionine biosynthesis protein MetW 0.76 0.32

    Or look for negative cofitness