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  • Top cofit genes for Psest_3576 from Pseudomonas stutzeri RCH2

    excinuclease ABC, A subunit
    SEED: Excinuclease ABC subunit A
    KEGG: excinuclease ABC subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2259 excinuclease ABC, C subunit 0.99 0.91
    2 Psest_1296 excinuclease ABC, B subunit 0.99 0.89
    3 Psest_0004 recF protein 0.90 0.85
    4 Psest_3090 DNA repair protein RecO 0.95 0.85
    5 Psest_0962 DNA repair protein RecN 0.92 0.74
    6 Psest_2545 recombination protein RecR 0.94 0.71
    7 Psest_3401 DNA repair protein RadA 0.94 0.62
    8 Psest_1653 transcription-repair coupling factor (mfd) 0.96 0.59
    9 Psest_1869 ATP-dependent DNA helicase RecQ 0.80 0.59
    10 Psest_2236 Rad3-related DNA helicases 0.63 0.58
    11 Psest_2235 DNA damage response nuclease (from data) 0.64 0.56
    12 Psest_1544 single-stranded-DNA-specific exonuclease RecJ 0.82 0.44
    13 Psest_1525 Uncharacterized protein conserved in bacteria 0.56 0.43
    14 Psest_4219 DNA polymerase I 0.70 0.37
    15 Psest_2872 protein RecA 0.88 0.35
    16 Psest_0252 hypothetical protein 0.72 0.34
    17 Psest_3767 tyrosine recombinase XerC 0.72 0.34
    18 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) 0.68 0.33
    19 Psest_1126 Uncharacterized protein conserved in bacteria 0.43 0.33
    20 Psest_3118 endonuclease III 0.71 0.33

    Or look for negative cofitness