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  • Top cofit genes for Psest_3562 from Pseudomonas stutzeri RCH2

    ABC-type antimicrobial peptide transport system, ATPase component
    SEED: SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_4175 Flagellar motor switch/type III secretory pathway protein no 0.31
    2 Psest_0589 Uncharacterized protein conserved in bacteria no 0.30
    3 Psest_3845 phosphate regulon transcriptional regulatory protein PhoB 0.61 0.29
    4 Psest_2174 Small-conductance mechanosensitive channel no 0.29
    5 Psest_0578 hypothetical protein no 0.28
    6 Psest_0804 hypothetical protein no 0.28
    7 Psest_4123 Site-specific recombinase XerD no 0.28
    8 Psest_2882 hypothetical protein no 0.27
    9 Psest_1807 Chain length determinant protein no 0.27
    10 Psest_4251 hypothetical protein no 0.27
    11 Psest_0556 Curlin associated repeat. no 0.27
    12 Psest_4159 flagellar motor stator protein MotA no 0.27
    13 Psest_4250 hypothetical protein no 0.27
    14 Psest_3685 OAH/OAS sulfhydrylase no 0.27
    15 Psest_2690 outer membrane porin, OprD family. no 0.26
    16 Psest_0465 Acetyltransferase (isoleucine patch superfamily) no 0.26
    17 Psest_1217 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.33 0.25
    18 Psest_0252 hypothetical protein no 0.25
    19 Psest_2874 Predicted acyltransferases no 0.25
    20 Psest_2387 FolB domain 0.42 0.25

    Or look for negative cofitness