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Cofit
Protein
Homologs
Top cofit genes for Psest_3539 from
Pseudomonas stutzeri RCH2
exonuclease SbcD
SEED: Exonuclease SbcD
KEGG: exonuclease SbcD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_0056
Glutathione S-transferase
0.20
0.38
2
Psest
_3157
hypothetical protein
no
0.35
3
Psest
_0994
L-aspartate-alpha-decarboxylase
0.21
0.32
4
Psest
_3966
Predicted thioesterase
0.17
0.31
5
Psest
_3068
hypothetical protein
no
0.31
6
Psest
_2889
Predicted flavoprotein involved in K+ transport
no
0.30
7
Psest
_3660
PAS domain S-box
no
0.30
8
Psest
_3976
PAS domain S-box
no
0.29
9
Psest
_0343
hypothetical membrane protein, TIGR01666
no
0.28
10
Psest
_0233
hypothetical protein
no
0.28
11
Psest
_4169
ATPase FliI/YscN family
no
0.28
12
Psest
_0247
NAD-dependent aldehyde dehydrogenases
0.58
0.27
13
Psest
_0638
Predicted lactoylglutathione lyase
no
0.27
14
Psest
_2441
hypothetical protein
no
0.27
15
Psest
_1081
hypothetical protein
no
0.26
16
Psest
_1537
Bacterioferritin-associated ferredoxin
no
0.25
17
Psest
_0555
Cytosine/uracil/thiamine/allantoin permeases
no
0.25
18
Psest
_1795
Flagellar motor component
no
0.25
19
Psest
_2515
cytochrome c oxidase, subunit II
no
0.25
20
Psest
_4133
RNA polymerase sigma factor, sigma-70 family
0.13
0.25
Or look for
negative cofitness