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  • Top cofit genes for Psest_3525 from Pseudomonas stutzeri RCH2

    Formamidopyrimidine-DNA glycosylase
    SEED: Endonuclease
    KEGG: endonuclease VIII

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3472 Long-chain acyl-CoA synthetases (AMP-forming) no 0.37
    2 Psest_3540 hypothetical protein no 0.35
    3 Psest_2169 malto-oligosyltrehalose synthase no 0.34
    4 Psest_2889 Predicted flavoprotein involved in K+ transport no 0.34
    5 Psest_2928 Subtilisin-like serine proteases no 0.34
    6 Psest_0730 O-6-methylguanine DNA methyltransferase no 0.33
    7 Psest_2922 Lhr-like helicases no 0.33
    8 Psest_3445 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs no 0.33
    9 Psest_3086 hypothetical protein no 0.33
    10 Psest_2888 Transcriptional activator of acetoin/glycerol metabolism no 0.33
    11 Psest_2362 Zn-dependent hydrolases, including glyoxylases no 0.33
    12 Psest_1560 hypothetical protein no 0.32
    13 Psest_0562 magnesium-translocating P-type ATPase no 0.32
    14 Psest_2924 Short-chain alcohol dehydrogenase of unknown specificity no 0.32
    15 Psest_2890 diguanylate cyclase (GGDEF) domain no 0.32
    16 Psest_0408 Protein involved in catabolism of external DNA no 0.32
    17 Psest_1795 Flagellar motor component no 0.32
    18 Psest_4299 diguanylate cyclase (GGDEF) domain no 0.31
    19 Psest_1137 hypothetical protein no 0.31
    20 Psest_1545 Anaerobic dehydrogenases, typically selenocysteine-containing no 0.31

    Or look for negative cofitness