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  • Top cofit genes for Psest_3434 from Pseudomonas stutzeri RCH2

    Serine phosphatase RsbU, regulator of sigma subunit
    SEED: Serine phosphatase RsbU, regulator of sigma subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3900 Spermidine/putrescine-binding periplasmic protein no 0.49
    2 Psest_0446 hypothetical protein 0.72 0.48
    3 Psest_0264 monofunctional biosynthetic peptidoglycan transglycosylase 0.26 0.47
    4 Psest_1841 lipid kinase YegS no 0.46
    5 Psest_0247 NAD-dependent aldehyde dehydrogenases no 0.45
    6 Psest_0923 Glutaredoxin, GrxC family no 0.44
    7 Psest_3734 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis no 0.44
    8 Psest_3157 hypothetical protein no 0.43
    9 Psest_1725 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain no 0.43
    10 Psest_3235 Protein of unknown function (DUF1329). no 0.43
    11 Psest_0341 flavoprotein, HI0933 family no 0.43
    12 Psest_3901 diguanylate cyclase (GGDEF) domain no 0.42
    13 Psest_0270 carbamate kinase no 0.42
    14 Psest_2551 1-aminocyclopropane-1-carboxylate deaminase no 0.42
    15 Psest_3975 Signal transduction histidine kinase no 0.42
    16 Psest_0931 putative quinone oxidoreductase, YhdH/YhfP family no 0.40
    17 Psest_0487 Uncharacterized protein conserved in bacteria no 0.40
    18 Psest_3100 RNA polymerase sigma factor RpoE no 0.40
    19 Psest_1455 diguanylate cyclase (GGDEF) domain no 0.40
    20 Psest_3708 Arabinose efflux permease no 0.40

    Or look for negative cofitness