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  • Top cofit genes for Psest_3401 from Pseudomonas stutzeri RCH2

    DNA repair protein RadA
    SEED: DNA repair protein RadA
    KEGG: DNA repair protein RadA/Sms

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0962 DNA repair protein RecN 0.93 0.62
    2 Psest_3576 excinuclease ABC, A subunit 0.94 0.62
    3 Psest_3090 DNA repair protein RecO 0.80 0.61
    4 Psest_2259 excinuclease ABC, C subunit 0.91 0.60
    5 Psest_0004 recF protein 0.83 0.59
    6 Psest_1653 transcription-repair coupling factor (mfd) 0.78 0.58
    7 Psest_1296 excinuclease ABC, B subunit 0.92 0.57
    8 Psest_2545 recombination protein RecR 0.81 0.51
    9 Psest_2235 DNA damage response nuclease (from data) 0.56 0.50
    10 Psest_1869 ATP-dependent DNA helicase RecQ 0.80 0.46
    11 Psest_1525 Uncharacterized protein conserved in bacteria 0.61 0.46
    12 Psest_2236 Rad3-related DNA helicases 0.52 0.41
    13 Psest_4219 DNA polymerase I 0.86 0.39
    14 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) 0.45 0.38
    15 Psest_1519 DNA polymerase elongation subunit (family B) 0.88 0.37
    16 Psest_3767 tyrosine recombinase XerC 0.64 0.34
    17 Psest_3578 Catalase no 0.31
    18 Psest_3210 Transcriptional regulator no 0.30
    19 Psest_3577 Predicted carboxypeptidase no 0.29
    20 Psest_2872 protein RecA 0.82 0.28

    Or look for negative cofitness