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Cofit
Protein
Homologs
Top cofit genes for Psest_3349 from
Pseudomonas stutzeri RCH2
Sel1 repeat.
SEED: FOG: TPR repeat, SEL1 subfamily
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2441
hypothetical protein
no
0.45
2
Psest
_0056
Glutathione S-transferase
0.10
0.45
3
Psest
_3976
PAS domain S-box
no
0.45
4
Psest
_0539
Acyl-CoA dehydrogenases
no
0.44
5
Psest
_3043
periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family
no
0.43
6
Psest
_3472
Long-chain acyl-CoA synthetases (AMP-forming)
no
0.42
7
Psest
_2900
hypothetical protein
no
0.42
8
Psest
_3318
Predicted Zn-dependent proteases and their inactivated homologs
no
0.40
9
Psest
_2530
cytochrome c oxidase, cbb3-type, subunit III
no
0.40
10
Psest
_1537
Bacterioferritin-associated ferredoxin
no
0.40
11
Psest
_2229
Uncharacterized protein conserved in bacteria
0.12
0.40
12
Psest
_0891
Uncharacterized protein conserved in bacteria
no
0.39
13
Psest
_0373
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
no
0.39
14
Psest
_0247
NAD-dependent aldehyde dehydrogenases
no
0.39
15
Psest
_1407
RecA-superfamily ATPases implicated in signal transduction
no
0.38
16
Psest
_1404
Methyltransferase domain.
no
0.38
17
Psest
_3347
TonB-dependent siderophore receptor
0.94
0.38
18
Psest
_0270
carbamate kinase
no
0.38
19
Psest
_3235
Protein of unknown function (DUF1329).
no
0.37
20
Psest
_0638
Predicted lactoylglutathione lyase
no
0.37
Or look for
negative cofitness