Top cofit genes for Psest_3296 from Pseudomonas stutzeri RCH2

Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SEED: Outer membrane stress sensor protease DegS

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Psest_3100		RNA polymerase sigma factor RpoE	0.96	0.72
2	Psest_1725		Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	0.48	0.67
3	Psest_0538		Signal transduction histidine kinase	0.41	0.58
4	Psest_3216		diguanylate cyclase (GGDEF) domain	no	0.58
5	Psest_3217		PAS domain S-box	no	0.58
6	Psest_1924		adhesin-associated MmpL efflux pump (from data)	0.48	0.56
7	Psest_1923		adhesin-associated BNR repeat protein (from data)	no	0.55
8	Psest_3235		Protein of unknown function (DUF1329).	0.43	0.54
9	Psest_0446		hypothetical protein	no	0.54
10	Psest_0192		Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	0.86	0.52
11	Psest_0247		NAD-dependent aldehyde dehydrogenases	no	0.52
12	Psest_3963		PAS domain S-box	no	0.51
13	Psest_0190		Uncharacterized conserved protein	no	0.50
14	Psest_4273		Lysophospholipase	no	0.49
15	Psest_3974		Anti-sigma regulatory factor (Ser/Thr protein kinase)	no	0.49
16	Psest_0693		His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	no	0.49
17	Psest_0539		Acyl-CoA dehydrogenases	0.33	0.48
18	Psest_2383		Predicted transcriptional regulators	0.33	0.48
19	Psest_2441		hypothetical protein	no	0.47
20	Psest_3976		PAS domain S-box	no	0.47

Or look for negative cofitness