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Cofit
Protein
Homologs
Top cofit genes for Psest_3217 from
Pseudomonas stutzeri RCH2
PAS domain S-box
SEED: FIG00959769: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3216
diguanylate cyclase (GGDEF) domain
no
0.97
2
Psest
_0693
His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
no
0.74
3
Psest
_0446
hypothetical protein
no
0.74
4
Psest
_0717
Protein of unknown function (DUF1631).
no
0.73
5
Psest
_1725
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
no
0.72
6
Psest
_3100
RNA polymerase sigma factor RpoE
no
0.67
7
Psest
_1924
adhesin-associated MmpL efflux pump
(from data)
no
0.66
8
Psest
_0538
Signal transduction histidine kinase
no
0.65
9
Psest
_4008
PAS domain S-box
no
0.64
10
Psest
_1187
exodeoxyribonuclease III
no
0.63
11
Psest
_4293
PAS domain S-box/diguanylate cyclase (GGDEF) domain
no
0.63
12
Psest
_1840
Undecaprenyl-phosphate glucose phosphotransferase
no
0.62
13
Psest
_4382
hypothetical protein
no
0.62
14
Psest
_2551
1-aminocyclopropane-1-carboxylate deaminase
no
0.61
15
Psest
_3974
Anti-sigma regulatory factor (Ser/Thr protein kinase)
no
0.59
16
Psest
_1923
adhesin-associated BNR repeat protein
(from data)
no
0.59
17
Psest
_1455
diguanylate cyclase (GGDEF) domain
no
0.59
18
Psest
_2260
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
no
0.58
19
Psest
_2066
ABC-type uncharacterized transport system, permease component
no
0.58
20
Psest
_3296
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
no
0.58
Or look for
negative cofitness