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Cofit
Protein
Homologs
Top cofit genes for Psest_0316 from
Pseudomonas stutzeri RCH2
Cytochrome c556
SEED: Cytochrome c556
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3514
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
(from data)
no
0.29
2
Psest
_1531
hypothetical protein
no
0.26
3
Psest
_2883
Predicted membrane protein involved in D-alanine export
no
0.25
4
Psest
_1557
Phosphoenolpyruvate carboxylase
no
0.24
5
Psest
_2379
PAS domain S-box
no
0.23
6
Psest
_3511
Maleylacetoacetate isomerase (EC 5.2.1.2)
(from data)
no
0.23
7
Psest
_3808
Protein of unknown function (DUF3360).
no
0.23
8
Psest
_1028
Cyclic nucleotide-binding domain.
no
0.22
9
Psest
_1071
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
no
0.22
10
Psest
_1682
Periplasmic serine proteases (ClpP class)
no
0.22
11
Psest
_0787
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
no
0.22
12
Psest
_2882
hypothetical protein
no
0.22
13
Psest
_2517
hypothetical protein
no
0.21
14
Psest
_3509
Methyl-accepting chemotaxis protein
no
0.21
15
Psest
_3438
Glutamate dehydrogenase/leucine dehydrogenase
no
0.21
16
Psest
_2386
GTP cyclohydrolase I
no
0.21
17
Psest
_0803
prepilin-type N-terminal cleavage/methylation domain
no
0.21
18
Psest
_2431
Transglycosylase.
no
0.21
19
Psest
_2851
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
0.56
0.20
20
Psest
_2297
hypothetical protein
no
0.20
Or look for
negative cofitness