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  • Top cofit genes for Psest_3129 from Pseudomonas stutzeri RCH2

    tyrosine recombinase XerD
    SEED: Tyrosine recombinase XerD
    KEGG: integrase/recombinase XerD

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3767 tyrosine recombinase XerC 0.91 0.31
    2 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) 0.42 0.26
    3 Psest_1296 excinuclease ABC, B subunit 0.81 0.25
    4 Psest_0962 DNA repair protein RecN 0.82 0.23
    5 Psest_4219 DNA polymerase I 0.75 0.23
    6 Psest_1525 Uncharacterized protein conserved in bacteria 0.49 0.22
    7 Psest_2714 7-cyano-7-deazaguanine reductase 0.56 0.22
    8 Psest_1143 Small-conductance mechanosensitive channel 0.52 0.21
    9 Psest_1496 Holliday junction DNA helicase, RuvA subunit 0.86 0.21
    10 Psest_3576 excinuclease ABC, A subunit 0.72 0.21
    11 Psest_1285 hypothetical protein no 0.21
    12 Psest_0216 Predicted permeases no 0.21
    13 Psest_0998 poly(A) polymerase 0.69 0.21
    14 Psest_3118 endonuclease III 0.67 0.21
    15 Psest_3090 DNA repair protein RecO 0.63 0.21
    16 Psest_1953 deoxyguanosinetriphosphate triphosphohydrolase, putative 0.29 0.20
    17 Psest_0577 Predicted transcriptional regulators no 0.20
    18 Psest_4191 Transcriptional regulator 0.60 0.20
    19 Psest_1505 Organic radical activating enzymes 0.34 0.20
    20 Psest_2933 Signal transduction histidine kinase no 0.20

    Or look for negative cofitness