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  • Top cofit genes for Psest_3107 from Pseudomonas stutzeri RCH2

    uracil-DNA glycosylase
    SEED: Uracil-DNA glycosylase, family 1
    KEGG: uracil-DNA glycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1869 ATP-dependent DNA helicase RecQ 0.39 0.26
    2 Psest_2179 DNA ligase D no 0.22
    3 Psest_1886 Uncharacterized protein conserved in bacteria no 0.22
    4 Psest_0063 tryptophan synthase, beta subunit 0.76 0.22
    5 Psest_1215 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) no 0.21
    6 Psest_3647 Indole-3-glycerol phosphate synthase 0.72 0.21
    7 Psest_3684 Di- and tricarboxylate transporters 0.34 0.21
    8 Psest_3532 Peptidase propeptide and YPEB domain. no 0.21
    9 Psest_3576 excinuclease ABC, A subunit 0.78 0.21
    10 Psest_1771 hypothetical protein no 0.20
    11 Psest_3782 Alcohol dehydrogenase, class IV no 0.20
    12 Psest_2545 recombination protein RecR 0.61 0.20
    13 Psest_1525 Uncharacterized protein conserved in bacteria 0.53 0.20
    14 Psest_1888 Sua5/YciO/YrdC/YwlC family protein 0.41 0.20
    15 Psest_1296 excinuclease ABC, B subunit 0.69 0.20
    16 Psest_4018 hypothetical protein no 0.20
    17 Psest_0004 recF protein 0.35 0.20
    18 Psest_0652 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components no 0.20
    19 Psest_0062 tryptophan synthase, alpha subunit 0.76 0.20
    20 Psest_3521 H+/gluconate symporter and related permeases no 0.20

    Or look for negative cofitness