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Cofit
Protein
Homologs
Top cofit genes for Psest_3052 from
Pseudomonas stutzeri RCH2
Site-specific recombinase XerD
SEED: putative integrase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_4123
Site-specific recombinase XerD
no
0.25
2
Psest
_0414
biotin biosynthesis protein BioC
no
0.25
3
Psest
_2680
transcriptional regulator, BolA protein family
no
0.23
4
Psest
_4216
hypothetical protein
no
0.23
5
Psest
_3040
Uncharacterized protein involved in formation of periplasmic nitrate reductase
no
0.21
6
Psest
_1539
Mn2+ and Fe2+ transporters of the NRAMP family
no
0.21
7
Psest
_3230
Uncharacterized conserved protein
no
0.21
8
Psest
_1541
TIGR00370 family protein
no
0.21
9
Psest
_0126
type VI secretion protein, VC_A0111 family
no
0.21
10
Psest
_3834
NAD(P)H-nitrite reductase
no
0.20
11
Psest
_1888
Sua5/YciO/YrdC/YwlC family protein
no
0.20
12
Psest
_4122
hypothetical protein
no
0.20
13
Psest
_4319
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
no
0.20
14
Psest
_3226
Predicted membrane protein
no
0.20
15
Psest
_0589
Uncharacterized protein conserved in bacteria
no
0.19
16
Psest
_2239
RES domain.
no
0.19
17
Psest
_2226
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
no
0.19
18
Psest
_0266
thiamine biosynthesis protein ThiS
no
0.18
19
Psest
_4250
hypothetical protein
no
0.18
20
Psest
_1474
phosphoribosylaminoimidazole synthetase
no
0.18
Or look for
negative cofitness