Top cofit genes for Psest_0299 from Pseudomonas stutzeri RCH2

Chemotaxis signal transduction protein
SEED: type IV pili signal transduction protein PilI
KEGG: twitching motility protein PilI

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Psest_3374		Tfp pilus assembly protein, tip-associated adhesin PilY1	no	0.40
2	Psest_3373		Tfp pilus assembly protein PilX	no	0.40
3	Psest_3370		prepilin-type N-terminal cleavage/methylation domain	no	0.40
4	Psest_0302		Chemotaxis protein histidine kinase and related kinases	0.76	0.39
5	Psest_1041		Predicted membrane protein	0.32	0.39
6	Psest_2601		Membrane protein involved in the export of O-antigen and teichoic acid	no	0.39
7	Psest_0879		Transcriptional regulator	no	0.38
8	Psest_2600		Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis	no	0.37
9	Psest_1966		Glycine/D-amino acid oxidases (deaminating)	no	0.36
10	Psest_4345		Bacteriophytochrome (light-regulated signal transduction histidine kinase)	0.32	0.35
11	Psest_0301		Methylase of chemotaxis methyl-accepting proteins	0.96	0.35
12	Psest_2604		WbqC-like protein family.	no	0.35
13	Psest_3372		Tfp pilus assembly protein PilW	no	0.35
14	Psest_3371		type IV pilus modification protein PilV	no	0.34
15	Psest_0897		VRR-NUC domain.	no	0.34
16	Psest_3192		diguanylate cyclase (GGDEF) domain	0.45	0.34
17	Psest_0884		Toxin with endonuclease activity YhaV.	no	0.34
18	Psest_3431		Phage integrase family.	no	0.33
19	Psest_4215		hypothetical protein	no	0.33
20	Psest_0624		hypothetical protein	no	0.33

Or look for negative cofitness