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  • Top cofit genes for Psest_3020 from Pseudomonas stutzeri RCH2

    Cell wall-associated hydrolases (invasion-associated proteins)
    SEED: NLP/P60 family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0032 D-alanyl-D-alanine carboxypeptidase 0.79 0.30
    2 Psest_1098 Restriction endonuclease S subunits no 0.30
    3 Psest_3372 Tfp pilus assembly protein PilW no 0.29
    4 Psest_3019 Cell wall-associated hydrolases (invasion-associated proteins) 0.46 0.28
    5 Psest_0172 Uncharacterized protein conserved in bacteria 0.80 0.27
    6 Psest_1096 hypothetical protein no 0.27
    7 Psest_3371 type IV pilus modification protein PilV no 0.26
    8 Psest_1153 Cation/multidrug efflux pump no 0.25
    9 Psest_0515 rare lipoprotein A 0.65 0.25
    10 Psest_2342 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.74 0.25
    11 Psest_1016 putative TIM-barrel protein, nifR3 family 0.30 0.25
    12 Psest_1097 hypothetical protein no 0.25
    13 Psest_2070 FOG: LysM repeat 0.85 0.25
    14 Psest_1154 RND family efflux transporter, MFP subunit no 0.24
    15 Psest_2379 PAS domain S-box no 0.24
    16 Psest_1100 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases no 0.24
    17 Psest_2581 Uncharacterized protein conserved in bacteria 0.43 0.24
    18 Psest_1934 Predicted thioesterase no 0.24
    19 Psest_1613 hypothetical protein no 0.24
    20 Psest_3072 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 0.84 0.24

    Or look for negative cofitness