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Cofit
Protein
Homologs
Top cofit genes for Psest_2943 from
Pseudomonas stutzeri RCH2
Pirin-related protein
SEED: Pirin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_0947
Phage integrase family.
no
0.33
2
Psest
_0949
Site-specific recombinase XerD
no
0.31
3
Psest
_1481
Predicted membrane protein
no
0.30
4
Psest
_3420
Predicted Zn peptidase
no
0.29
5
Psest
_0935
hypothetical protein
no
0.29
6
Psest
_1710
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
no
0.28
7
Psest
_0434
hypothetical protein
no
0.27
8
Psest
_0441
Subtilisin-like serine proteases
no
0.27
9
Psest
_4046
hypothetical protein
no
0.26
10
Psest
_2294
nitrite reductase, copper-containing
no
0.26
11
Psest
_0703
diguanylate cyclase (GGDEF) domain
no
0.26
12
Psest
_2938
transporter, SSS family
0.33
0.26
13
Psest
_0612
outer membrane porin, OprD family.
no
0.26
14
Psest
_2817
Transcriptional regulator
no
0.25
15
Psest
_3430
hypothetical protein
no
0.25
16
Psest
_2524
cytochrome c oxidase, cbb3-type, subunit I
0.38
0.25
17
Psest
_1095
hypothetical protein
no
0.25
18
Psest
_3432
Site-specific recombinase XerD
no
0.25
19
Psest
_3405
Type I restriction-modification system methyltransferase subunit
0.49
0.25
20
Psest
_3431
Phage integrase family.
no
0.24
Or look for
negative cofitness