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  • Top cofit genes for Psest_2811 from Pseudomonas stutzeri RCH2

    Uncharacterized conserved protein
    SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
    KEGG: tRNA pseudouridine synthase D

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2551 1-aminocyclopropane-1-carboxylate deaminase no 0.43
    2 Psest_2702 PAS domain S-box no 0.42
    3 Psest_3157 hypothetical protein no 0.38
    4 Psest_0446 hypothetical protein no 0.38
    5 Psest_3975 Signal transduction histidine kinase no 0.37
    6 Psest_3976 PAS domain S-box 0.61 0.36
    7 Psest_0438 NACHT domain. no 0.36
    8 Psest_3423 Site-specific recombinase XerC no 0.36
    9 Psest_2000 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.46 0.36
    10 Psest_0928 Gluconolactonase 0.25 0.36
    11 Psest_4293 PAS domain S-box/diguanylate cyclase (GGDEF) domain 0.71 0.35
    12 Psest_3734 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis no 0.34
    13 Psest_2802 Na+/proline symporter no 0.34
    14 Psest_1455 diguanylate cyclase (GGDEF) domain no 0.34
    15 Psest_0931 putative quinone oxidoreductase, YhdH/YhfP family 0.45 0.34
    16 Psest_1841 lipid kinase YegS no 0.34
    17 Psest_2288 trigger factor 0.38 0.34
    18 Psest_3174 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase no 0.33
    19 Psest_0270 carbamate kinase 0.53 0.33
    20 Psest_2026 Uncharacterized conserved protein no 0.33

    Or look for negative cofitness