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Cofit
Protein
Homologs
Top cofit genes for Psest_2702 from
Pseudomonas stutzeri RCH2
PAS domain S-box
SEED: Signal transduction histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2551
1-aminocyclopropane-1-carboxylate deaminase
no
0.53
2
Psest
_0446
hypothetical protein
0.51
0.46
3
Psest
_4293
PAS domain S-box/diguanylate cyclase (GGDEF) domain
no
0.46
4
Psest
_3975
Signal transduction histidine kinase
no
0.45
5
Psest
_3216
diguanylate cyclase (GGDEF) domain
no
0.43
6
Psest
_3688
1-acyl-sn-glycerol-3-phosphate acyltransferase
no
0.42
7
Psest
_2811
Uncharacterized conserved protein
no
0.42
8
Psest
_3734
Uncharacterized protein involved in an early stage of isoprenoid biosynthesis
no
0.42
9
Psest
_0931
putative quinone oxidoreductase, YhdH/YhfP family
no
0.42
10
Psest
_2288
trigger factor
no
0.42
11
Psest
_3976
PAS domain S-box
no
0.42
12
Psest
_3397
Cytochrome c peroxidase
no
0.42
13
Psest
_2441
hypothetical protein
no
0.42
14
Psest
_0693
His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
no
0.42
15
Psest
_2950
putative NAD(P)H quinone oxidoreductase, PIG3 family
no
0.41
16
Psest
_1455
diguanylate cyclase (GGDEF) domain
no
0.41
17
Psest
_3116
electron transport complex, RnfABCDGE type, G subunit
no
0.41
18
Psest
_0891
Uncharacterized protein conserved in bacteria
no
0.40
19
Psest
_2289
Nitric oxide reductase activation protein
no
0.40
20
Psest
_4008
PAS domain S-box
no
0.40
Or look for
negative cofitness