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  • Top cofit genes for Psest_2636 from Pseudomonas stutzeri RCH2

    tryptophan synthase, beta subunit
    SEED: Tryptophan synthase beta chain like (EC 4.2.1.20)
    KEGG: tryptophan synthase beta chain

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2673 Arabinose efflux permease no 0.45
    2 Psest_2011 Predicted permease no 0.42
    3 Psest_3510 Na+-dependent transporters of the SNF family no 0.39
    4 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family no 0.36
    5 Psest_0542 AMP nucleosidase no 0.35
    6 Psest_3578 Catalase no 0.32
    7 Psest_2635 choline/carnitine/betaine transport no 0.31
    8 Psest_0218 Acyl-CoA hydrolase no 0.30
    9 Psest_1061 alpha,alpha-trehalose-phosphate synthase [UDP-forming] no 0.30
    10 Psest_3776 choline/carnitine/betaine transport no 0.30
    11 Psest_1470 succinyldiaminopimelate transaminase no 0.28
    12 Psest_2672 Predicted membrane protein no 0.27
    13 Psest_2627 hypothetical protein no 0.26
    14 Psest_3451 tRNA (uracil-5-)-methyltransferase no 0.26
    15 Psest_3172 cation diffusion facilitator family transporter no 0.26
    16 Psest_3025 Cytochrome bd-type quinol oxidase, subunit 1 0.49 0.25
    17 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) no 0.25
    18 Psest_1944 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) no 0.25
    19 Psest_1339 ATP-dependent helicase HrpA no 0.24
    20 Psest_0063 tryptophan synthase, beta subunit no 0.24

    Or look for negative cofitness