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  • Top cofit genes for Psest_0025 from Pseudomonas stutzeri RCH2

    DNA protecting protein DprA
    SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
    KEGG: DNA processing protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3775 Mg chelatase-related protein 0.51 0.30
    2 Psest_3472 Long-chain acyl-CoA synthetases (AMP-forming) no 0.28
    3 Psest_0539 Acyl-CoA dehydrogenases no 0.28
    4 Psest_3318 Predicted Zn-dependent proteases and their inactivated homologs 0.34 0.28
    5 Psest_1135 Protein of unknown function (DUF3182). no 0.27
    6 Psest_0788 Uncharacterized conserved protein no 0.27
    7 Psest_2666 Predicted acyl-CoA transferases/carnitine dehydratase no 0.26
    8 Psest_0270 carbamate kinase 0.30 0.26
    9 Psest_1224 Arabinose efflux permease no 0.26
    10 Psest_1404 Methyltransferase domain. no 0.26
    11 Psest_3068 hypothetical protein no 0.26
    12 Psest_0899 Excinuclease ATPase subunit no 0.26
    13 Psest_3975 Signal transduction histidine kinase no 0.26
    14 Psest_1408 Predicted unusual protein kinase no 0.25
    15 Psest_3886 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit no 0.25
    16 Psest_2242 Arabinose efflux permease no 0.25
    17 Psest_3703 3-oxoacyl-(acyl-carrier-protein) reductase, putative 0.42 0.25
    18 Psest_3966 Predicted thioesterase 0.21 0.25
    19 Psest_0287 probable DNA metabolism protein no 0.25
    20 Psest_0055 hypothetical protein no 0.25

    Or look for negative cofitness