Top cofit genes for Psest_0248 from Pseudomonas stutzeri RCH2

Transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Psest_4097		PAS domain S-box/diguanylate cyclase (GGDEF) domain	0.66	0.71
2	Psest_0262		PAS domain S-box	no	0.56
3	Psest_0445		PAS domain S-box/diguanylate cyclase (GGDEF) domain	0.31	0.56
4	Psest_1163		diguanylate cyclase (GGDEF) domain	0.68	0.50
5	Psest_0491		PAS domain S-box/diguanylate cyclase (GGDEF) domain	no	0.49
6	Psest_3806		Phosphomannomutase	no	0.49
7	Psest_1765		Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	0.31	0.47
8	Psest_3288		type IV-A pilus assembly ATPase PilB	0.48	0.47
9	Psest_0297		Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	no	0.45
10	Psest_3715		type IV pilus secretin (or competence protein) PilQ	0.25	0.44
11	Psest_1260		type IV pilus biogenesis/stability protein PilW	0.52	0.43
12	Psest_1695		Tfp pilus assembly protein PilZ	no	0.43
13	Psest_1334		Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II	no	0.42
14	Psest_3809		hypothetical protein	no	0.41
15	Psest_3375		prepilin-type N-terminal cleavage/methylation domain	0.50	0.41
16	Psest_1944		NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data)	0.53	0.40
17	Psest_3716		Tfp pilus assembly protein PilP	no	0.40
18	Psest_4005		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	no	0.39
19	Psest_4081		Glutaminase (EC 3.5.1.2) (from data)	0.58	0.39
20	Psest_3287		Type II secretory pathway, component PulF	0.13	0.39

Or look for negative cofitness