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  • Top cofit genes for Psest_2321 from Pseudomonas stutzeri RCH2

    methylisocitrate lyase
    SEED: Methylisocitrate lyase (EC 4.1.3.30)
    KEGG: methylisocitrate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2320 2-methylcitrate synthase/citrate synthase II 0.92 0.36
    2 Psest_3434 Serine phosphatase RsbU, regulator of sigma subunit 0.31 0.32
    3 Psest_2773 glycerol kinase 0.85 0.30
    4 Psest_2322 Transcriptional regulators 0.76 0.29
    5 Psest_2023 isocitrate dehydrogenase, NADP-dependent, monomeric type 0.59 0.27
    6 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.24 0.27
    7 Psest_0341 flavoprotein, HI0933 family no 0.26
    8 Psest_1650 hypothetical protein no 0.26
    9 Psest_1079 Isopropylmalate/homocitrate/citramalate synthases 0.78 0.26
    10 Psest_3954 Small protein A (tmRNA-binding) no 0.25
    11 Psest_1000 PAS domain S-box 0.66 0.25
    12 Psest_1717 benzoate transporter no 0.25
    13 Psest_3082 Predicted secreted protein no 0.25
    14 Psest_3202 Flavodoxins 0.62 0.25
    15 Psest_1480 arsenate reductase (glutaredoxin) 0.61 0.24
    16 Psest_3039 periplasmic nitrate reductase, NapE protein no 0.24
    17 Psest_0999 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.76 0.24
    18 Psest_4336 Uncharacterized iron-regulated membrane protein no 0.24
    19 Psest_0550 Predicted permease, DMT superfamily 0.43 0.24
    20 Psest_3200 Uncharacterized protein conserved in bacteria no 0.24

    Or look for negative cofitness