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Cofit
Protein
Homologs
Top cofit genes for Psest_2312 from
Pseudomonas stutzeri RCH2
Small-conductance mechanosensitive channel
SEED: CmpX
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2772
MIP family channel proteins
no
0.42
2
Psest
_0466
Lipopolysaccharide kinase (Kdo/WaaP) family.
0.46
0.40
3
Psest
_0455
ADP-heptose:LPS heptosyltransferase
no
0.39
4
Psest
_0449
Glutamine synthetase adenylyltransferase
0.39
0.38
5
Psest
_1608
glycerol-3-phosphate O-acyltransferase
no
0.37
6
Psest
_2773
glycerol kinase
0.63
0.37
7
Psest
_4075
symporter for L-glutamate, L-glutamine, and L-proline
(from data)
0.41
0.37
8
Psest
_1813
pseudaminic acid biosynthesis-associated protein PseG
no
0.35
9
Psest
_1814
pseudaminic acid biosynthesis N-acetyl transferase
no
0.35
10
Psest
_0197
TRAP transporter, 4TM/12TM fusion protein
no
0.33
11
Psest
_0461
Glycosyltransferase involved in LPS biosynthesis
no
0.33
12
Psest
_2314
Mg2+ and Co2+ transporters
0.67
0.32
13
Psest
_0462
Lipid A core - O-antigen ligase and related enzymes
0.31
0.32
14
Psest
_2304
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
no
0.32
15
Psest
_2095
Arabinose efflux permease
no
0.31
16
Psest
_4110
Deoxycytidylate deaminase
no
0.31
17
Psest
_2439
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
(from data)
no
0.30
18
Psest
_1462
3-oxoacyl-[acyl-carrier-protein] synthase III
no
0.30
19
Psest
_1840
Undecaprenyl-phosphate glucose phosphotransferase
0.45
0.30
20
Psest
_1001
hypothetical protein
0.31
0.30
Or look for
negative cofitness