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  • Top cofit genes for Psest_2312 from Pseudomonas stutzeri RCH2

    Small-conductance mechanosensitive channel
    SEED: CmpX

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2772 MIP family channel proteins no 0.42
    2 Psest_0466 Lipopolysaccharide kinase (Kdo/WaaP) family. 0.46 0.40
    3 Psest_0455 ADP-heptose:LPS heptosyltransferase no 0.39
    4 Psest_0449 Glutamine synthetase adenylyltransferase 0.83 0.38
    5 Psest_1608 glycerol-3-phosphate O-acyltransferase no 0.37
    6 Psest_2773 glycerol kinase 0.76 0.37
    7 Psest_4075 symporter for L-glutamate, L-glutamine, and L-proline (from data) 0.41 0.37
    8 Psest_1813 pseudaminic acid biosynthesis-associated protein PseG no 0.35
    9 Psest_1814 pseudaminic acid biosynthesis N-acetyl transferase no 0.35
    10 Psest_0197 TRAP transporter, 4TM/12TM fusion protein no 0.33
    11 Psest_0461 Glycosyltransferase involved in LPS biosynthesis no 0.33
    12 Psest_2314 Mg2+ and Co2+ transporters 0.67 0.32
    13 Psest_0462 Lipid A core - O-antigen ligase and related enzymes 0.31 0.32
    14 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family no 0.32
    15 Psest_2095 Arabinose efflux permease no 0.31
    16 Psest_4110 Deoxycytidylate deaminase no 0.31
    17 Psest_2439 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) no 0.30
    18 Psest_1462 3-oxoacyl-[acyl-carrier-protein] synthase III no 0.30
    19 Psest_1840 Undecaprenyl-phosphate glucose phosphotransferase 0.45 0.30
    20 Psest_1001 hypothetical protein 0.31 0.30

    Or look for negative cofitness