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Cofit
Protein
Homologs
Top cofit genes for Psest_2252 from
Pseudomonas stutzeri RCH2
Predicted permeases
SEED: Transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3426
Uncharacterized protein conserved in bacteria
no
0.24
2
Psest
_0151
Response regulator with putative antiterminator output domain
no
0.23
3
Psest
_1789
Zn-dependent hydrolases, including glyoxylases
no
0.23
4
Psest
_2279
coenzyme PQQ biosynthesis protein E
no
0.22
5
Psest
_2080
hypothetical protein
no
0.21
6
Psest
_2049
Outer membrane receptor proteins, mostly Fe transport
no
0.20
7
Psest
_2766
hypothetical protein
no
0.19
8
Psest
_2050
Arabinose efflux permease
no
0.19
9
Psest
_3974
Anti-sigma regulatory factor (Ser/Thr protein kinase)
no
0.19
10
Psest
_0647
Arabinose efflux permease
no
0.19
11
Psest
_2058
Zn-dependent hydrolases, including glyoxylases
no
0.19
12
Psest
_4140
Acyl-CoA dehydrogenases
no
0.18
13
Psest
_3197
hypothetical protein
no
0.18
14
Psest
_2796
HNH endonuclease.
no
0.18
15
Psest
_0994
L-aspartate-alpha-decarboxylase
no
0.18
16
Psest
_2799
Xanthosine triphosphate pyrophosphatase
no
0.18
17
Psest
_2562
PAS domain S-box/diguanylate cyclase (GGDEF) domain
no
0.18
18
Psest
_2513
Predicted membrane protein
no
0.18
19
Psest
_0607
Co/Zn/Cd efflux system component
no
0.18
20
Psest
_4004
Uncharacterized conserved protein
no
0.18
Or look for
negative cofitness