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  • Top cofit genes for Psest_2236 from Pseudomonas stutzeri RCH2

    Rad3-related DNA helicases
    SEED: DinG family ATP-dependent helicase CPE1197

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3090 DNA repair protein RecO 0.44 0.66
    2 Psest_2235 DNA damage response nuclease (from data) 0.62 0.65
    3 Psest_2259 excinuclease ABC, C subunit 0.54 0.65
    4 Psest_0004 recF protein 0.54 0.61
    5 Psest_1296 excinuclease ABC, B subunit 0.58 0.59
    6 Psest_3576 excinuclease ABC, A subunit 0.63 0.58
    7 Psest_1869 ATP-dependent DNA helicase RecQ 0.51 0.58
    8 Psest_0962 DNA repair protein RecN 0.47 0.56
    9 Psest_2545 recombination protein RecR 0.57 0.54
    10 Psest_1653 transcription-repair coupling factor (mfd) 0.39 0.50
    11 Psest_1544 single-stranded-DNA-specific exonuclease RecJ 0.51 0.43
    12 Psest_3401 DNA repair protein RadA 0.52 0.41
    13 Psest_1978 DNA-directed DNA polymerase III (polc) 0.37 0.31
    14 Psest_2857 Rad3-related DNA helicases 0.53 0.28
    15 Psest_1525 Uncharacterized protein conserved in bacteria 0.42 0.26
    16 Psest_1519 DNA polymerase elongation subunit (family B) 0.61 0.24
    17 Psest_1126 Uncharacterized protein conserved in bacteria 0.35 0.24
    18 Psest_4098 Superfamily I DNA and RNA helicases 0.47 0.23
    19 Psest_4320 Zn-dependent oligopeptidases no 0.23
    20 Psest_1280 TonB-dependent copper receptor no 0.23

    Or look for negative cofitness