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  • Top cofit genes for Psest_2223 from Pseudomonas stutzeri RCH2

    cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
    SEED: transcriptional regulator, Crp/Fnr family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2412 Predicted phosphatase no 0.24
    2 Psest_2171 malto-oligosyltrehalose trehalohydrolase no 0.23
    3 Psest_2230 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes no 0.23
    4 Psest_4331 Uncharacterized conserved protein no 0.22
    5 Psest_2161 Metal-dependent hydrolase no 0.20
    6 Psest_2403 Methyl-accepting chemotaxis protein no 0.19
    7 Psest_2411 PAS domain S-box no 0.19
    8 Psest_2857 Rad3-related DNA helicases no 0.19
    9 Psest_2432 Uncharacterized protein conserved in bacteria no 0.19
    10 Psest_1396 Cytosine/adenosine deaminases no 0.18
    11 Psest_1539 Mn2+ and Fe2+ transporters of the NRAMP family no 0.18
    12 Psest_0507 Uncharacterized membrane-associated protein no 0.18
    13 Psest_1296 excinuclease ABC, B subunit no 0.18
    14 Psest_1934 Predicted thioesterase no 0.18
    15 Psest_1136 Prolyl oligopeptidase family. no 0.18
    16 Psest_4123 Site-specific recombinase XerD no 0.18
    17 Psest_1789 Zn-dependent hydrolases, including glyoxylases no 0.18
    18 Psest_2661 Isopropylmalate/homocitrate/citramalate synthases no 0.18
    19 Psest_4080 Carbonic anhydrase no 0.18
    20 Psest_0120 hypothetical protein no 0.18

    Or look for negative cofitness